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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139845930_139846791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139845930 - 139846791

Intron Length:

862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAATAA

U12 Branch Point Sequence:

AAGTAGTTACTT

Flanking Amino Acid:

LYVVFWLLCVAFTTFLCLYG

Intron Amino Acid Position:

392

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

74.1

36.5

Major BPS

50.5

0.01

1.1

47.7

35.7

Major PPT

77.2

0.61

0.8

76.7

31.9

Minor 5ss

32.2

-2

3.1

41.8

Minor BPS

43.3

-0.4

2.3

60.16

43.6

Associated Gene:

Gene:

PTDSS1

Ensembl Gene ID:

ENSAPLG00000012776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023868

139843575 - 139868313

24739

ENSAPLT00000013338

139843651 - 139868313

24663