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Intron Name: Anas_platyrhynchos_platyrhynchos_2_139846892_139849823_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139846892 - 139849823

Intron Length:

2932

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TATTCACTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAC

U12 Branch Point Sequence:

TTTTCTTGTATT

Flanking Amino Acid:

KRVGTQCWVFGVIAFLEAIV

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

85.2

32.2

Major BPS

82.3

0.8

83.6

25.8

Major PPT

76.6

0.6

0.9

69.8

35.3

Minor 5ss

38.2

-1.3

3.4

49.9

46.4

Minor BPS

62.7

0.48

1.8

84.45

36.2

Associated Gene:

Gene:

PTDSS1

Ensembl Gene ID:

ENSAPLG00000012776

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023868

139843575 - 139868313

24739

ENSAPLT00000013338

139843651 - 139868313

24663