Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_139887468_139887555_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

139887468 - 139887555

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTACGTGAA

5'SS Class:

major

3'SS Sequence:

CAGTCACTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TGTTCCCCAACT

Flanking Amino Acid:

KSKPDVVFRHFSGGGRLIDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.4

0.36

1.2

62.1

38.5

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

71.4

0.48

0.9

66.6

39.3

Minor 5ss

33.8

-1.8

3.5

49.1

47.1

Minor BPS

0.55

1.9

86.5

38.7

Associated Gene:

Gene:

UQCRB

Ensembl Gene ID:

ENSAPLG00000012746

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013262

139887014 - 139890786

3773