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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140073423_140075757_R

Intron Information:

Intron Rank:

128873

Intron Class:

major

Intron Phase:

Intron Coordinates:

140073423 - 140075757

Intron Length:

2335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTTAT

U12 Branch Point Sequence:

CATGCCGCAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.9

0.94

0.8

75.1

35.1

Major BPS

0.47

1.2

61.1

45.5

Major PPT

84.8

0.78

0.8

81.6

35.5

Minor 5ss

29.8

-2.3

3.3

37.5

47.2

Minor BPS

45.9

-0.2

2.3

64.86

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016471

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044356

140007821 - 140076268

68448

ENSAPLT00000030945

140066313 - 140076268

9956

ENSAPLT00000024514

140009829 - 140076268

66440