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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140111761_140113312_F

Intron Information:

Intron Rank:

149424

Intron Class:

major

Intron Phase:

Intron Coordinates:

140111761 - 140113312

Intron Length:

1552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTGTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATGAT

U12 Branch Point Sequence:

CTGTTATGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.8

26.2

Major BPS

84.6

0.86

41.2

Major PPT

84.2

0.77

0.9

84.9

29.9

Minor 5ss

45.6

-0.5

2.5

57.6

47.1

Minor BPS

44.6

-0.3

1.9

61.08

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042685

140111572 - 140115816

4245