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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140224267_140227244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140224267 - 140227244

Intron Length:

2978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGCGTC

5'SS Class:

major

3'SS Sequence:

GTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAT

U12 Branch Point Sequence:

TGTTACAAAATG

Flanking Amino Acid:

KEEEGAAAKGRSAKMLMSPG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.2

71.7

38.6

Major BPS

0.57

1.2

41.2

Major PPT

87.2

0.84

0.8

84.6

Minor 5ss

37.3

-1.4

3.3

50.5

46.2

Minor BPS

46.3

-0.4

2.1

58.18

43.3

Associated Gene:

Gene:

C8orf37

Ensembl Gene ID:

ENSAPLG00000012602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013124

140224118 - 140232051

7934