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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140229380_140230215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140229380 - 140230215

Intron Length:

836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACAA

5'SS Class:

strong_major

3'SS Sequence:

TGTCTTTGACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

TTGTCTTTGACC

Flanking Amino Acid:

PNGIGTNISKRTCDQLRCTA

Intron Amino Acid Position:

128

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

70.2

35.7

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

71.8

0.49

66.3

44.1

Minor 5ss

30.6

-2.2

3.1

38.6

46.4

Minor BPS

78.4

0.88

1.1

81.35

33.5

Associated Gene:

Gene:

C8orf37

Ensembl Gene ID:

ENSAPLG00000012602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013124

140224118 - 140232051

7934