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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140230312_140231891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140230312 - 140231891

Intron Length:

1580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTC

5'SS Class:

strong_major

3'SS Sequence:

ATTTGATTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGATTCTAAACT

Flanking Amino Acid:

WDQSCDYLFFRNNMPELSKL

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.4

39.6

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.47

1.1

65.8

Minor 5ss

37.7

-1.4

3.2

52.9

44.2

Minor BPS

67.2

0.62

1.7

81.23

40.2

Associated Gene:

Gene:

C8orf37

Ensembl Gene ID:

ENSAPLG00000012602

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013124

140224118 - 140232051

7934