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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140279847_140280346_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140279847 - 140280346

Intron Length:

500

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGTGTG

5'SS Class:

major

3'SS Sequence:

TTTTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCATAT

U12 Branch Point Sequence:

ACCATATGGACT

Flanking Amino Acid:

AKAYPAFYCTVALDAYLYNI

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

63.5

42.9

Major BPS

52.8

0.07

1.1

36.2

Major PPT

90.8

0.92

0.6

85.1

29.7

Minor 5ss

29.9

-2.3

3.5

39.9

46.1

Minor BPS

43.7

-0.4

1.7

55.38

40.5

Associated Gene:

Gene:

NDUFAF6

Ensembl Gene ID:

ENSAPLG00000008314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008693

140279718 - 140294955

15238