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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140280404_140284007_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140280404 - 140284007

Intron Length:

3604

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CATTTACTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAC

U12 Branch Point Sequence:

TTCCCCTCACCT

Flanking Amino Acid:

ASQAHIHLEHARSFRKKVPA

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

80.4

27.8

Major BPS

66.4

0.41

37.6

Major PPT

81.6

0.71

0.8

78.1

Minor 5ss

41.7

-0.9

57.1

40.8

Minor BPS

57.3

0.31

1.9

77.75

44.4

Associated Gene:

Gene:

NDUFAF6

Ensembl Gene ID:

ENSAPLG00000008314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008693

140279718 - 140294955

15238