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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140285435_140286261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140285435 - 140286261

Intron Length:

827

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTGCA

5'SS Class:

major

3'SS Sequence:

TCTGCACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TGTTTCTAAACA

Flanking Amino Acid:

ALLYLTLEMLGVRDIHADHA

Intron Amino Acid Position:

188

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

40.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

78.1

0.63

0.9

35.7

Minor 5ss

31.1

-2.2

3.3

32.2

42.4

Minor BPS

70.4

0.64

1.6

79.59

36.6

Associated Gene:

Gene:

NDUFAF6

Ensembl Gene ID:

ENSAPLG00000008314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008693

140279718 - 140294955

15238