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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140286365_140287662_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140286365 - 140287662

Intron Length:

1298

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GTTCAAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTACTGAAGG

Flanking Amino Acid:

MWFTKIIDEREKNLDDRAYR

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

71.5

0.48

63.4

41.6

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

56.1

0.05

69.51

43.4

Associated Gene:

Gene:

NDUFAF6

Ensembl Gene ID:

ENSAPLG00000008314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008693

140279718 - 140294955

15238