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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140334898_140336071_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
140334898 - 140336071

Intron Length:
1174

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGGCAC

5'SS Class:
strong_major

3'SS Sequence:
CTTTCTTTGAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
CTTTCTTTGAAA

Flanking Amino Acid:
TSLFIASKLEEIYAPKIQEF

Intron Amino Acid Position:
207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
88.3
0.9
0.9
73
38.2

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
70.6
0.46
1.1
74.1
34.5

Minor 5ss
31
-2.2
3.3
41
45.6

Minor BPS
68.3
0.57
1.4
75.09
36.4

Associated Gene:

Gene:
CCNE2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

140328891 - 140338699
9809