Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140336168_140336405_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140336168 - 140336405

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAGCT

5'SS Class:

strong_major

3'SS Sequence:

TAATCTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GTTTGTTTAATC

Flanking Amino Acid:

IVRMELIMLKALKWELCPVT

Intron Amino Acid Position:

239

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

74.4

33.9

Major BPS

81.8

0.79

1.1

34.5

Major PPT

82.6

0.73

0.9

77.2

36.4

Minor 5ss

33.1

-1.9

3.4

48.8

46.8

Minor BPS

65.8

0.47

1.7

74.58

36.6

Associated Gene:

Gene:

CCNE2

Ensembl Gene ID:

ENSAPLG00000007612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007956

140328891 - 140338699

9809