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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1403535_1404090_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1403535 - 1404090

Intron Length:

556

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CCCATCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TATCCCCCATCC

Flanking Amino Acid:

APPASRKRLEAPEPSPQKEK

Intron Amino Acid Position:

1072

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

67.6

39.4

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.41

0.8

61.2

Minor 5ss

28.6

-2.5

2.7

25.4

36.3

Minor BPS

46.1

-0.3

2.1

62.81

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029857

1399479 - 1405614

6136

ENSAPLT00000019056

1399479 - 1407649

8171