Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140354015_140354507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140354015 - 140354507

Intron Length:

493

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGTTTAT

5'SS Class:

major

3'SS Sequence:

ATGCTGTTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATCAAT

U12 Branch Point Sequence:

ATTTCCAAGATA

Flanking Amino Acid:

KISAEEIQCQVCYDLGAIYF

Intron Amino Acid Position:

252

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

76.8

34.6

Major BPS

69.1

0.47

1.2

34.1

Major PPT

75.9

0.58

68.6

41.6

Minor 5ss

40.5

-1.1

3.2

57.9

46.8

Minor BPS

51.2

0.03

1.9

69.43

36.8

Associated Gene:

Gene:

INTS8

Ensembl Gene ID:

ENSAPLG00000007030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007357

140340017 - 140360896

20880