Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140359698_140360766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140359698 - 140360766

Intron Length:

1069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGCGTGGC

5'SS Class:

major

3'SS Sequence:

GCGTTTTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

TTACATGGAATT

Flanking Amino Acid:

LEQHLRKPSPDPPPVQLIVQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

58.1

41.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

78.7

0.65

0.9

37.4

Minor 5ss

-2.6

3.2

34.5

41.9

Minor BPS

43.3

-0.4

2.1

64.17

40.2

Associated Gene:

Gene:

INTS8

Ensembl Gene ID:

ENSAPLG00000007030

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007357

140340017 - 140360896

20880