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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140365485_140366404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140365485 - 140366404

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGAAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTCATACAACA

Flanking Amino Acid:

AISMCLLVFLALLVSYTVWS

Intron Amino Acid Position:

2514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

76.9

33.7

Major BPS

78.6

0.71

79.6

32.9

Major PPT

95.5

1.02

0.5

88.9

28.1

Minor 5ss

31.4

-2.1

3.1

39.2

46.2

Minor BPS

44.8

-0.4

1.9

59.21

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085