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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140369310_140369973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140369310 - 140369973

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TATTGTCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTTCTGTTAGTA

Flanking Amino Acid:

ADGSGYMRLEVDEGFFCVNI

Intron Amino Acid Position:

2281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

80.4

0.68

0.8

78.1

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

48.7

-0.1

2.2

68.1

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085