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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140370141_140372434_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

140370141 - 140372434

Intron Length:

2294

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCAA

5'SS Class:

major

3'SS Sequence:

GCGTTGTGCTTAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAG

U12 Branch Point Sequence:

TCCTCCTTGTTT

Flanking Amino Acid:

PGYAGPACDKVLPEWAFGRD

Intron Amino Acid Position:

2225

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.1

58.8

41.7

Major BPS

67.4

0.43

1.5

65.3

43.7

Major PPT

59.6

0.22

57.4

43.2

Minor 5ss

29.1

-2.4

3.4

38.6

46.4

Minor BPS

46.5

-0.1

3.5

74.27

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085