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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140372885_140372953_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

140372885 - 140372953

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAA|GCAAACTGG

5'SS Class:

major

3'SS Sequence:

AAAGAAAATTCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTAAG

U12 Branch Point Sequence:

GAAAAGAAAATT

Flanking Amino Acid:

DLSASKQTNNNQTVLILSTN

Intron Amino Acid Position:

2102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.3

50.9

45.6

Major BPS

61.8

0.29

1.5

69.7

35.5

Major PPT

49.8

-0

1.1

42.5

45.6

Minor 5ss

-1.8

4.1

46.1

43.8

Minor BPS

33.2

-1.2

2.2

45.78

38.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085