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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140372973_140373026_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

140372973 - 140373026

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTGAAGCCT

5'SS Class:

weak_major

3'SS Sequence:

ACAAACAGACAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAA

U12 Branch Point Sequence:

AGGTAAAAAACA

Flanking Amino Acid:

KKMSPVDLSASKQTNNNQTV

Intron Amino Acid Position:

2096

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.1

49.7

40.6

Major BPS

53.6

0.09

59.9

32.5

Major PPT

43.2

-0.3

1.1

28.6

34.6

Minor 5ss

30.2

-2.3

3.5

49.2

46.6

Minor BPS

39.6

-0.7

2.1

50.07

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085