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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140383130_140383849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140383130 - 140383849

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTCAT

U12 Branch Point Sequence:

CTGTGGTCATTT

Flanking Amino Acid:

VTATANDQDEGANAKLRYQI

Intron Amino Acid Position:

1053

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.1

37.5

Major BPS

69.7

0.49

1.3

71.4

45.1

Major PPT

85.3

0.79

0.6

81.1

23.9

Minor 5ss

37.8

-1.4

47.1

48.3

Minor BPS

37.3

-0.8

2.5

55.1

47.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085