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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140392530_140392847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140392530 - 140392847

Intron Length:

318

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGATGT

5'SS Class:

strong_major

3'SS Sequence:

GGTTTATTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATACAT

U12 Branch Point Sequence:

TTGGGTTTATTT

Flanking Amino Acid:

VNNNKPVFRECTYYSDSTWV

Intron Amino Acid Position:

590

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

81.6

33.2

Major BPS

66.1

0.4

31.5

Major PPT

77.2

0.61

0.9

74.4

40.4

Minor 5ss

39.7

-1.2

3.1

56.6

47.5

Minor BPS

47.1

-0.1

2.1

66.59

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085