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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140397996_140398764_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140397996 - 140398764

Intron Length:

769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAA

U12 Branch Point Sequence:

TCCCTCTTTACA

Flanking Amino Acid:

FVPENTPAGEKIAVVEAVSF

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

78.2

36.3

Major BPS

58.2

0.2

1.1

49.1

Major PPT

84.6

0.78

0.7

78.9

26.7

Minor 5ss

38.6

-1.3

52.1

38.3

Minor BPS

56.3

0.19

1.7

64.06

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085