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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140399477_140403137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140399477 - 140403137

Intron Length:

3661

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

GCATCTCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCGAAT

U12 Branch Point Sequence:

TGCGAATGAGCT

Flanking Amino Acid:

LVKVHTGGGRDDDWYLCHVT

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.3

31.1

Major BPS

54.4

0.11

1.5

63.6

42.5

Major PPT

0.59

0.9

69.3

36.6

Minor 5ss

28.5

-2.5

3.5

37.1

47.5

Minor BPS

39.9

-0.6

56.08

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006639

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006900

140364516 - 140403600

39085