Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140423366_140424872_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140423366 - 140424872

Intron Length:

1507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTCCAACTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTGAT

U12 Branch Point Sequence:

TTTTCTCCAACT

Flanking Amino Acid:

SVTQVIFRRICGEPLKETVK

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.8

83.2

28.5

Major BPS

64.7

0.36

1.2

55.1

42.1

Major PPT

74.1

0.54

0.9

67.1

32.8

Minor 5ss

36.2

-1.6

2.7

42.6

38.5

Minor BPS

65.6

0.57

1.9

89.17

35.2

Associated Gene:

Gene:

DPY19L4

Ensembl Gene ID:

ENSAPLG00000006172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006412

140411963 - 140439305

27343