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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140432935_140434664_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
140432935 - 140434664

Intron Length:
1730

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAAAAA

5'SS Class:
major

3'SS Sequence:
CTTTTGCCTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GAATAAT

U12 Branch Point Sequence:
TTTCCAAGAATA

Flanking Amino Acid:
ELLKAPSFERGVYELTHNNK

Intron Amino Acid Position:
233

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.8
0.56
1
70.4
35.3

Major BPS
62.3
0.31
1.3
64.3
39.7

Major PPT
79.1
0.66
0.8
74
31.2

Minor 5ss
31.1
-2.2
3.2
39.8
45.8

Minor BPS
48.3
-0.1
1.9
68.62
36.9

Associated Gene:

Gene:
DPY19L4

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

140411963 - 140439305
27343