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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1404343_1404436_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1404343 - 1404436

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGG

5'SS Class:

major

3'SS Sequence:

TTGGATTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

TCCTTTTGGATT

Flanking Amino Acid:

APRRGEANHKGSCNESESND

Intron Amino Acid Position:

1156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

61.1

43.7

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

75.1

0.57

0.9

69.8

41.2

Minor 5ss

-2.5

3.5

37.8

47.1

Minor BPS

51.2

0.12

1.4

66.01

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029857

1399479 - 1405614

6136

ENSAPLT00000019056

1399479 - 1407649

8171