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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1404712_1404955_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1404712 - 1404955

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGACGG

5'SS Class:

major

3'SS Sequence:

AAAACCCCCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTTCAA

U12 Branch Point Sequence:

TGATCCTTCAAG

Flanking Amino Acid:

QSRSEKKARKAMSKLGLRQI

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

53.4

45.5

Major BPS

65.8

0.39

1.1

69.2

36.3

Major PPT

56.4

0.14

0.9

44.5

37.6

Minor 5ss

24.5

-2.9

3.1

29.7

43.1

Minor BPS

54.9

0.01

62.64

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029857

1399479 - 1405614

6136

ENSAPLT00000019056

1399479 - 1407649

8171