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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1405103_1405174_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1405103 - 1405174

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGATTT

5'SS Class:

strong_major

3'SS Sequence:

CTCGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGGAC

U12 Branch Point Sequence:

AGGACCCTAAGG

Flanking Amino Acid:

DIYIVFGEAKIEDLSQQVHK

Intron Amino Acid Position:

1263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

0.9

77.6

33.4

Major BPS

46.8

-0.2

1.4

43.4

39.2

Major PPT

71.8

0.49

0.8

65.4

30.5

Minor 5ss

-1.5

3.5

55.2

Minor BPS

45.1

-0.5

48.27

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030207

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029857

1399479 - 1405614

6136

ENSAPLT00000019056

1399479 - 1407649

8171