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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140566421_140566931_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140566421 - 140566931

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCCTGTCTG

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

TTTCCTTGTACT

Flanking Amino Acid:

QCARTWADELRYLHSHHFLE

Intron Amino Acid Position:

705

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.7

0.7

1.1

66.7

44.4

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

100

1.12

0.4

100

Minor 5ss

-2.4

3.8

40.9

45.4

Minor BPS

59.8

0.39

1.8

82.6

38.2

Associated Gene:

Gene:

VIRMA

Ensembl Gene ID:

ENSAPLG00000014267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035201

140558001 - 140581596

23596

ENSAPLT00000022727

140558001 - 140575428

17428