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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140571551_140572109_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140571551 - 140572109

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAATTT

5'SS Class:

major

3'SS Sequence:

TCTGTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAAAAG

U12 Branch Point Sequence:

AAAGGAAAAACC

Flanking Amino Acid:

PLPLPMQTTQVIEPHDIAVA

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

76.6

32.8

Major BPS

45.2

-0.3

1.5

53.4

38.7

Major PPT

78.5

0.64

0.8

73.3

31.7

Minor 5ss

49.3

-0

2.9

73.4

43.4

Minor BPS

34.2

-1.2

2.1

40.99

38.2

Associated Gene:

Gene:

VIRMA

Ensembl Gene ID:

ENSAPLG00000014267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027878

140558001 - 140581596

23596

ENSAPLT00000025096

140558001 - 140581596

23596

ENSAPLT00000014889

140558001 - 140581596

23596

ENSAPLT00000035201

140558001 - 140581596

23596