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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140577976_140578229_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140577976 - 140578229

Intron Length:

254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGCAG

5'SS Class:

major

3'SS Sequence:

TGTCTCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

TCTGTCTCATTG

Flanking Amino Acid:

PDSLQNLFNNRTTYVLADVM

Intron Amino Acid Position:

1523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

62.9

43.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

80.4

0.68

0.9

74.2

35.2

Minor 5ss

29.5

-2.4

3.3

37.6

47.1

Minor BPS

45.3

-0.5

1.9

50.31

44.7

Associated Gene:

Gene:

VIRMA

Ensembl Gene ID:

ENSAPLG00000014267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014889

140558001 - 140581596

23596

ENSAPLT00000035201

140558001 - 140581596

23596

ENSAPLT00000027878

140558001 - 140581596

23596

ENSAPLT00000025096

140558001 - 140581596

23596