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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140646238_140647504_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

140646238 - 140647504

Intron Length:

1267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATCTATT

5'SS Class:

weak_major

3'SS Sequence:

TTATTTTTAATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTATTTTTAATA

Flanking Amino Acid:

HPCLLFKAVKEKSCDPMNDE

Intron Amino Acid Position:

611

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

1.1

83.5

35.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.7

0.67

0.9

77.8

35.1

Minor 5ss

61.6

0.39

2.1

77.4

37.4

Minor BPS

76.4

0.83

79.34

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014366

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015014

140601271 - 140653844

52574