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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140715508_140718044_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140715508 - 140718044

Intron Length:

2537

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTACCAT

U12 Branch Point Sequence:

TCTCCTCTACCA

Flanking Amino Acid:

GFQFLLVIQWAMCQNLGDLS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

69.2

38.5

Major BPS

53.2

0.08

1.4

64.5

41.2

Major PPT

84.5

0.78

0.7

79.6

25.9

Minor 5ss

34.7

-1.7

2.8

35.3

41.4

Minor BPS

49.1

-0

1.9

65.11

41.5

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669

ENSAPLT00000015542

140715438 - 140737106

21669