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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140718144_140720086_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140718144 - 140720086

Intron Length:

1943

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCAGC

5'SS Class:

major

3'SS Sequence:

TTTTCAAATCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TTTTTTTCAAAT

Flanking Amino Acid:

EGAGVRPIYQVECLDENGDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

42.1

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.34

1.1

62.8

41.6

Minor 5ss

39.8

-1.1

2.8

52.6

44.1

Minor BPS

66.1

0.58

1.6

85.04

35.1

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669