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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140720226_140721300_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140720226 - 140721300

Intron Length:

1075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCATC

5'SS Class:

strong_major

3'SS Sequence:

CTAATCCAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

TCTTCTCTAATC

Flanking Amino Acid:

TGVVRQNSRAGKPFMYVHAT

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

78.1

36.6

Major BPS

82.2

0.8

0.9

81.6

Major PPT

61.1

0.25

55.5

38.9

Minor 5ss

-0.7

2.9

60.8

43.8

Minor BPS

65.6

0.47

1.6

74.53

36.7

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669

ENSAPLT00000015542

140715438 - 140737106

21669