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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140722212_140723463_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140722212 - 140723463

Intron Length:

1252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

TTGTGTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

CTATCCTGACTT

Flanking Amino Acid:

TETHPVNISQVHSNEADVIY

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

64.9

37.8

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

82.4

0.73

0.8

81.2

36.5

Minor 5ss

30.6

-2.2

3.5

42.1

44.9

Minor BPS

56.6

0.29

1.8

73.5

43.6

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669

ENSAPLT00000015542

140715438 - 140737106

21669