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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140725496_140726889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140725496 - 140726889

Intron Length:

1394

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTACCATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

TGTTCTTTTACC

Flanking Amino Acid:

YSLKVMVTDADFQTICEVQV

Intron Amino Acid Position:

426

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

88.7

25.1

Major BPS

74.2

0.6

39.4

Major PPT

80.2

0.68

0.9

74.8

34.8

Minor 5ss

43.5

-0.7

2.6

59.2

45.4

Minor BPS

71.4

0.66

1.6

79.48

35.6

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669

ENSAPLT00000015542

140715438 - 140737106

21669