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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140733847_140736248_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140733847 - 140736248

Intron Length:

2402

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAGGTGAC

5'SS Class:

major

3'SS Sequence:

TCTCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CTTTGCTTTACT

Flanking Amino Acid:

GILLGVLLVIGAIIGGVFFH

Intron Amino Acid Position:

798

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

68.5

36.9

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

90.8

0.92

0.6

83.9

31.1

Minor 5ss

31.7

-2.1

3.4

39.3

41.1

Minor BPS

0.49

2.1

Associated Gene:

Gene:

CDH17

Ensembl Gene ID:

ENSAPLG00000014890

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028979

140715438 - 140737106

21669

ENSAPLT00000015542

140715438 - 140737106

21669