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Intron Name: Anas_platyrhynchos_platyrhynchos_2_1407631_1408436_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1407631 - 1408436

Intron Length:

806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCGGC

5'SS Class:

major

3'SS Sequence:

TCCCTCGGGGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTTAC

U12 Branch Point Sequence:

TTCTCCTTCCCT

Flanking Amino Acid:

YGDSRKFLLLGLRPFIPEKD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.1

57.5

42.3

Major BPS

78.8

0.71

0.9

69.7

37.1

Major PPT

55.8

0.13

53.2

36.7

Minor 5ss

30.8

-2.2

3.3

32.5

42.6

Minor BPS

47.1

-0.1

3.6

83.36

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017641

1400176 - 1410617

10442