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Intron Name: Anas_platyrhynchos_platyrhynchos_2_140823013_140825246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140823013 - 140825246

Intron Length:

2234

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAAATTG

5'SS Class:

major

3'SS Sequence:

TTTCTTTCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAAAAATT

Flanking Amino Acid:

EPIEKSIFYNDEGHSFDDVL

Intron Amino Acid Position:

1006

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.1

0.54

66.2

40.3

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

88.3

0.86

0.6

85.2

22.2

Minor 5ss

41.4

-1

3.2

56.7

47.5

Minor BPS

52.6

0.16

2.2

82.17

39.2

Associated Gene:

Gene:

TMEM67

Ensembl Gene ID:

ENSAPLG00000001214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001287

140822352 - 140849679

27328