Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140835389_140835766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

140835389 - 140835766

Intron Length:

378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGAATA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

GTTTTTCCAAAG

Flanking Amino Acid:

LQYREMYVNQGSNMNNWLLT

Intron Amino Acid Position:

514

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

33.2

Major BPS

90.4

0.7

90.2

19.3

Major PPT

73.3

0.52

74.8

33.9

Minor 5ss

-1.6

3.2

48.9

46.9

Minor BPS

44.9

-0.5

1.9

54.13

40.7

Associated Gene:

Gene:

TMEM67

Ensembl Gene ID:

ENSAPLG00000001214

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001287

140822352 - 140849679

27328