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© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_140835924_140836702_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
140835924 - 140836702
Intron Length:
779

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGT|GTAAGTAAG
5'SS Class:
major
3'SS Sequence:
TTTTTTCAAATAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAA
U12 Branch Point Sequence:
TTTTTTTCAAAT
Flanking Amino Acid:
YVFGTTYEQSCKISVSKILL
Intron Amino Acid Position:
462

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
74.8
0.58
1.1
70.9
40.9
Major BPS
90.8
1.01
0.7
91.9
19.6
Major PPT
76.7
0.6
0.9
75.1
33.7
Minor 5ss
37.1
-1.5
2.8
43.3
43.8
Minor BPS
66.1
0.58
1.6
85.04
35.1

Associated Gene:

Gene:
TMEM67
Ensembl Gene ID:
ENSAPLG00000001214
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000001287
140822352 - 140849679
27328