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Intron Name: Anas_platyrhynchos_platyrhynchos_2_141421488_141473497_F

Intron Information:

Intron Rank:

142647

Intron Class:

major

Intron Phase:

Intron Coordinates:

141421488 - 141473497

Intron Length:

52010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTACATACA

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATGAA

U12 Branch Point Sequence:

TTTTCTGTAATG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

66.9

38.3

Major BPS

67.7

0.44

38.9

Major PPT

88.4

0.86

0.9

94.6

18.5

Minor 5ss

34.4

-1.8

2.9

40.3

40.4

Minor BPS

63.9

0.3

2.1

74.65

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026886

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028132

141421422 - 141483358

61937