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Intron Name: Anas_platyrhynchos_platyrhynchos_2_14153724_14160092_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

14153724 - 14160092

Intron Length:

6369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTAAATCACTAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TCTTCCCTAAAT

Flanking Amino Acid:

KLSTMDDQKTGSPTRDVGPS

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.06

0.7

93.7

19.9

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

0.02

1.1

53.5

40.3

Minor 5ss

39.4

-1.2

3.1

57.6

46.6

Minor BPS

68.7

0.66

1.8

86.25

39.3

Associated Gene:

Gene:

PARD3

Ensembl Gene ID:

ENSAPLG00000014767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021470

13864772 - 14307028

442257

ENSAPLT00000019870

13864772 - 14307028

442257

ENSAPLT00000047719

13864772 - 14307028

442257

ENSAPLT00000015447

13864772 - 14305998

441227

ENSAPLT00000041564

13864772 - 14307028

442257

ENSAPLT00000003606

13864772 - 14305998

441227

ENSAPLT00000038237

13864772 - 14307028

442257