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Intron Name: Anas_platyrhynchos_platyrhynchos_2_141654755_141656486_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141654755 - 141656486

Intron Length:

1732

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTTCTCAACA

Flanking Amino Acid:

RVRTLVLGLVNSTLTIEEFH

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

100

1.24

0.5

100

Major PPT

84.9

0.79

0.8

81.9

28.6

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

78.1

0.88

1.4

87.43

30.3

Associated Gene:

Gene:

RUNX1T1

Ensembl Gene ID:

ENSAPLG00000011326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038189

141589210 - 141699608

110399

ENSAPLT00000011836

141623506 - 141699608

76103

ENSAPLT00000041253

141608315 - 141699608

91294