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Intron Name: Anas_platyrhynchos_platyrhynchos_2_141656577_141664762_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

141656577 - 141664762

Intron Length:

8186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCAC

5'SS Class:

major

3'SS Sequence:

AACACTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTAAAT

U12 Branch Point Sequence:

ACCCCTGTAAAT

Flanking Amino Acid:

LRPFVIPFLKANLPLLQREL

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

58.5

40.4

Major BPS

67.2

0.43

1.2

73.3

39.1

Major PPT

70.2

0.46

0.9

62.2

38.7

Minor 5ss

37.2

-1.4

3.3

50.1

46.5

Minor BPS

-0.2

2.1

60.47

43.3

Associated Gene:

Gene:

RUNX1T1

Ensembl Gene ID:

ENSAPLG00000011326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041253

141608315 - 141699608

91294

ENSAPLT00000038189

141589210 - 141699608

110399

ENSAPLT00000011836

141623506 - 141699608

76103