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Intron Name: Anas_platyrhynchos_platyrhynchos_2_141973294_141973892_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
141973294 - 141973892

Intron Length:
599

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AGG|GTATGTAGT

5'SS Class:
major

3'SS Sequence:
TTTTCAATCTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTCAA

U12 Branch Point Sequence:
GACATCTTAATA

Flanking Amino Acid:
PRISKAQKRREKKAALEKER

Intron Amino Acid Position:
126

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.5
0.7
1
74.4
41.9

Major BPS
90.8
1.01
0.7
91.9
19.6

Major PPT
69.5
0.44
1.1
73.4
35

Minor 5ss
43.1
-0.8
2.6
51.2
45.4

Minor BPS
61
0.34
1.3
61.59
38.6

Associated Gene:

Gene:
OTUD6B

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

141969762 - 141978281
8520